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zhuchunyun 2025-04-14 22:21:37 +08:00
parent 44e7d8cbbf
commit 0f250c71fc
3 changed files with 10 additions and 4 deletions
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6
ruoyi-admin/src/main/java/com/ruoyi/script/service/impl/PatientScriptServiceImpl.java
View File

@ -243,15 +243,17 @@ public class PatientScriptServiceImpl implements PatientScriptService {
} else {
System.out.println("文件夹已存在，无需再次创建！");
}
patientScript.setPatientAge("0");
//处理数据处理格式
ShellUtil.execCmd("dos2unix "+dealDataSh);
shUtil(dealDataSh,patientScript);
if (StringUtils.isEmpty(patientScript.getPatientAge())){
patientScript.setPatientAge("0");
}
shMap.put("tr",patientScript.getRepetitionTime());
shMap.put("age",patientScript.getPatientAge());
//创建总脚本
createFile(shMap, shPath,"cpacSh.ftl");
scriptMapper.updateStatus(patientScript);
//处理脚本文件格式
ShellUtil.execCmd("dos2unix "+shPath);
ShellUtil.execCmd("dos2unix "+imgPath);

6
ruoyi-admin/src/main/resources/mapper/system/PatientScriptMapper.xml
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@ -38,7 +38,11 @@ PUBLIC "-//mybatis.org//DTD Mapper 3.0//EN"
update patient_script
set `status` = #{status}
,`res_image` = #{resImage}
,`res_info` = #{resInfo}
,`res_info` = #{resInfo},
patient_name = #{patientName},
patient_age = #{patientAge},
patient_sex = #{patientSex},
repetition_time = #{repetitionTime}
where id = #{id}
</update>
<delete id="removeByIds" parameterType="java.util.List">

2
ruoyi-admin/src/main/resources/static/dealData.ftl
View File

@ -8,4 +8,4 @@ rm -rf ./${playground}/BIDS_output/config.json
cp ./README ${playground}/BIDS_output/
echo "通过源文件进行二次处理"
docker run --rm -e DOCKER_VERSION_8395080871=27.3.1 -v /data/license.txt:/opt/freesurfer/license.txt:ro -v /data/${playground}/BIDS_output:/data:ro -v /data/${playground}/preprocessed:/out nipreps/fmriprep:23.2.3 /data /out participant --participant-label 001 --fs-no-reconall
python script.py --dicom_folder ${playground}
python scriptAge.py --dicom_folder ${playground}